demo_cmb_artificial_data

PURPOSE

SYNOPSIS

DESCRIPTION

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 Model balancing demo script

 o the model is read from an SBML or SBtab file
 o artificial data are generated
 o model balancing is performed
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CROSS-REFERENCE INFORMATION

• cmb_default_options cmb_options = cmb_default_options()
• cmb_filenames filenames = cmb_filenames(model_name, result_dir, network_sbml_file)
• cmb_model_artificial_data [network, bounds, prior, q_info, data, true, kinetic_data, state_data] = cmb_model_artificial_data(network_file, cmb_options, c_init, position_sbtab_file, constraint_sbtab_file)
• cmb_resourcedir
• model_balancing [optimal, calculation_time, gradient_V, init, cmb_options, V, kapp_max, preposterior, pp] = model_balancing(filenames, cmb_options, network, q_info, prior, bounds, data, true, init)