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cmb_load_and_convert_model_and_data

PURPOSE ^

[network, q_info, data, c_init, kinetic_data, state_data, conc_min, conc_max] = cmb_load_and_convert_model_and_data(cmb_options, file, file_options)

SYNOPSIS ^

function [network, q_info, data, c_init, kinetic_data, state_data, conc_min, conc_max] = cmb_load_and_convert_model_and_data(cmb_options, file, file_options)

DESCRIPTION ^

 [network, q_info, data, c_init, kinetic_data, state_data, conc_min, conc_max] = cmb_load_and_convert_model_and_data(cmb_options, file, file_options)

 Load model and data from SBtab files for model balancing
 
 Wrapper function around:
  - sbtab_load_network_model_and_data
  - state_data_to_data

 This function does not accept SBML files as inputs (to be implemented)

 Function arguments:
  'cmb_options':      data structure with model balancing options; 
                        for list of options used in this function, see state_data_to_data
  'file':             either a single SBtab filename or a cell array of such filenames (files to be combined)
  'file_options':     struct with (optional) fields
    .match_data_by         'ModelElementId' or 'KeggId';
    .metabolite_table_id   (default 'MetaboliteConcentration')
    .flux_table_id         (default 'Flux')
    .enzyme_table_id       (default 'EnzymeConcentration')
    .columns_mean:         cell array of column names for mean data values
                           (same columns names in metabolite, flux, and enzyme table!)
    .columns_std:          same, for std dev columns
    .columns_std:          same, for std dev columns
    .constraint_sbtab_file (optional) SBtab file with metabolite concentration constraints 
                           (table 'ConcentrationConstraint')

 Outputs
 conc_min, conc_max        vectors of concentration bounds (or empty, if no constraint_sbtab_file is given)

CROSS-REFERENCE INFORMATION ^

This function calls: This function is called by:
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