ES_SIMULATE_PERTURBATION_SAMPLE Predict the effects of a given differential profile
[res,es_result_list] = es_simulate_perturbation_sample(N,W,ind_ext,constraints,options,u_ratio,s_ratio,expansion,expansion_order,nrun)
Compute the predicted effects of a given differential profile
for enzyme concentrations and external concentrations
on concentrations and fluxes: do this for a number of model variants
with sampled elasticities and present a statistics of the results
N, W, ind_ext: structural information about the network
x_ratio: expression ratio column vector (or matrix, for several samples)
nrun: number of samples
constraints, options: options for elasticity sampling
s_ratio: external concentration ratio vector
u_ratio: expression ratio vector
expansion: {'logarithmic','non-logarithmic'}
-> depending on the expansion type, the output refers to logarithmic
or non-logarithmic values;
Outputs:
res: contains statistics over predicted effects
es_result_list: contains the results of all sampling runs