Home > elasticity_sampling > elasticity_sampling > es_simple > es_sbml_to_model.m

es_sbml_to_model

PURPOSE ^

ES_SBML_TO_MODEL Wrapper function around es_sample_model

SYNOPSIS ^

function [network, result, options, constraints] = es_sbml_to_model(sbml_filename, external_metabolites, cofactors, v_sign)

DESCRIPTION ^

ES_SBML_TO_MODEL Wrapper function around es_sample_model

 [network, result, options, constraints] = es_sbml_to_model(sbml_filename, external_metabolites, cofactors, v_sign)

 Wrapper function around es_sample_model

 Translates sbml file into matlab model structure with modular rate law kinetics and
 samples elasticities with some default choice of the sampling constraints and parameters

 Function arguments:
  sbml_filename         sbml file
  external_metabolites  will be set external (in addition to "dead ends" detected automatically)
  cofactors             will also be set external 
  v_sign                vector of predefined signs for flux distribution

CROSS-REFERENCE INFORMATION ^

This function calls: This function is called by:
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