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interaction_anova

PURPOSE ^

INFLUENCE_ANOVA - Anova of a variable characterising pairs reactions

SYNOPSIS ^

function p = interaction_anova(D,n_per,fdr,ind_intervention, verbose)

DESCRIPTION ^

INFLUENCE_ANOVA - Anova of a variable characterising pairs reactions 

p = influence_anova(D, n_per, fdr, ind_intervention)

 Anova of a variable characterising pairs reactions 
   (e.g., all second-order control coefficients for a single objective)

 Arguments:
 D:               data tensor (size nr x nr x n_sim x 2) where 
                       nr: # reactions (corresponds to 'reaction' vector)
                    n_sim: # number of MC samples
                        2: two qualitative conditions to be compared (e.g. different fluxes)
 fdr:              false discovery rate
 ind_intervention: reaction indices to be selected for the analysis (optional)

 The results are returned in a structure 'p' with fields

   p.mean_total               Mean value for all samples (total mean)
   p.mean_a                   Mean value for 1st variant
   p.mean_b                   Mean value for 2nd variant
   p.mean_delta               Difference between values for both variants

   p.p_value_mean_total       p value of [mean value for all samples ~= total mean]
   p.p_value_mean_a           p value of [mean value for 1st variant ~= total mean]
   p.p_value_mean_b           p value of [mean value for 2nd variant ~= total mean]
   p.p_value_mean_delta       p value of [difference between values for both variants
                                           ~= difference between values from shuffled variants]

   p.mean_total_significant   Significant elements for mean value for all samples
   p.mean_a_significant       Significant elements for mean value for 1st variant
   p.mean_b_significant       Significant elements for mean value for 2nd variant
   p.mean_delta_significant   Significant elements for difference between values for both variants
    Entries: 1 (for significantly high),  -1 (for significantly low)
   
   p.n_mean_total_significant # significant elements for mean value for all samples
   p.n_mean_a_significant     # significant elements for mean value for 1st variant
   p.n_mean_b_significant     # significant elements for mean value for 2nd variant
   p.n_mean_delta_significant # significant elements for difference between values for both variants

CROSS-REFERENCE INFORMATION ^

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