 Contents | MATLAB code for Metabolic Economics |
| cba_adjust_fluxes | CBA_ADJUST_FLUXES - Correct a flux mode to make it economical |
| cba_check | CBA_CHECK - Check flux mode, chem. pot. differences, and spec. flux costs for feasibility |
| cba_check_model | CBA_CHECK_MODEL - Check kinetic model for being in an enzyme-optimal state |
| cba_default_options | CBA_DEFAULT_OPTIONS - Default settings for directives in 'cba_options' and 'cba_constraints' |
| cba_economic_potentials | CBA_ECONOMIC_POTENTIALS - Compute the economic potentials and their sensitivities in a kinetic model |
| cba_economic_state | CBA_ECONOMIC_STATE - Find fluxes, chemical and economic potentials satisfying FBA/EBA/CBA constraints |
| cba_feasible_cycle | CBA_FEASIBLE_CYCLE - Check economical flux distribution (non-beneficial cycle criterion) |
| cba_feasible_efm | CBA_FEASIBLE_EFM - Test flux mode for economic feasibility (given non-beneficial flux modes) |
| cba_feasible_lp | CBA_FEASIBLE_LP - Check flux mode for EFA feasibility and choose enzyme costs and thermodynamic forces |
| cba_homogeneous_cost | CBA_HOMOGENEOUS_COST - Determine economic potentials from the principle of even cost |
| cba_reconstruct_model | CBA_RECONSTRUCT_MODEL - Build model from economical flux profile |
| cba_reconstruct_model_OLD | CBA_RECONSTRUCT_MODEL - Build model from economical flux profile |
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