Home > enzyme-cost-minimization > ecm_functions > ecm_below_threshold.m

ecm_below_threshold

PURPOSE

ECM_BELOW_THRESHOLD - Helper function for enzyme cost minimization

SYNOPSIS

function [ineq_constraints, eq_constraints] = ecm_below_threshold(ecm_score,xx,pp,u_threshold,x_min,x_max,ecm_options)

DESCRIPTION

 ECM_BELOW_THRESHOLD - Helper function for enzyme cost minimization
 
 function [ineq_constraints, eq_constraints] = ecm_below_threshold(ecm_score,xx,pp,u_threshold,x_min,x_max,ecm_options)

CROSS-REFERENCE INFORMATION

This function calls:

ecm_get_score ECM_GET_SCORE - Helper function
ecm_inequalities MEASURES_FOR_ENZYME_COSTS_INEQUALITIES - Helper function
ecm_regularisation ECM_REGULARISATION - Regularisation term for ECM

This function is called by:

ecm_enzyme_cost_minimization ECM_ENZYME_COST_MINIMIZATION - Compute optimal flux-specific enzyme costs for given flux distribution