ECM_SIMPLE - Wrapper script for Parameter Balancing or Enzyme Cost Minimisation
[report, errors] = ecm_simple(model_data_file, outdir, options)
This function reads an input file [model_data_file] in SBtab format, performs either
Parameter Balancing or ECM, and saves the results to an SBtab file in [outdir]
Fields of struct 'options':
options.actions string {'ecm_standard','parameter_balancing'} - default: 'ecm_standard'
options.make_report flag - show graphics (only used with 'ecm_standard') - default: 0
Possible actions: (in options.actions)
'parameter_balancing':
run parameter_balancing using standard settings,
input file: prepared model with data ("ModelData")
'ecm_standard':
run an ECM using standard settings,
input file: prepared model with data ("ModelData")
The function can also be called via the python script 'ecm.py'