Economics of periodic enzyme activities


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Oxidation and reduction (dynamic)

This model illustrates the idea that metabolism could oscillate, on the one hand, between between oxidative and reductive phases and, on the other, between high-energy and low-energy phases (with high or low ATP levels, respectively). In a first reaction (central metabolism(, substrate is converted into rediction equivalents (e.g., NADH produced in the TCA cyle). A second reaction (oxidative phosphorylation) converts reduction equivalents into ATP. A third reaction (anabolism) consumes NADH and ATP to produce biomass.

Forced oscillation (without adaptation) Spontaneous rhythm

Squares: enzyme levels   Circles: metabolite levels

Results (.pdf)   |   Network (.csv)